BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F01SP1|AL428080
(1047 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1748 1289 0.0
3x_Contig645 253 7e-67
>3x_Contig1748
Length = 22566
Score = 1289 bits (648), Expect = 0.0
Identities = 661/665 (99%), Gaps = 1/665 (0%)
Strand = Plus / Plus
Query: 1 gatcactgattttgtctacctattcggaaatggtgacagaacttgttccaatttcttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21888 gatcactgattttgtctacctattcggaaatggtgacagaacttgttccaatttcttcac 21947
Query: 61 atgaacatgcgttttcttattaatttggtccatattagtatttcctttctattcaacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21948 atgaacatgcgttttcttattaatttggtccatattagtatttcctttctattcaacttc 22007
Query: 121 ttaattcaccttcgtttatcagaatcaccattttttttcactgtctattcagagtcaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22008 ttaattcaccttcgtttatcagaatcaccattttttttcactgtctattcagagtcaact 22067
Query: 181 aaacatatgcaacgtccttgttgtctgtctatataagtacttttaaatattacttccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22068 aaacatatgcaacgtccttgttgtctgtctatataagtacttttaaatattacttccttc 22127
Query: 241 gttaacatgtactggttgcactagtattaatgccattcattacccatcgccagatttccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22128 gttaacatgtactggttgcactagtattaatgccattcattacccatcgccagatttccc 22187
Query: 301 cctgttactcatatttgtcacgtgtggtcacatgttttcatccgggtaaccatatcctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22188 cctgttactcatatttgtcacgtgtggtcacatgttttcatccgggtaaccatatcctga 22247
Query: 361 caagtaagaatccttttcgttttttgctgacgtgagawgacagttacccgtcccacatcc 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 22248 caagtaagaatccttttcgttttttgctgacgtgagatgacagttacccgtcccacatcc 22307
Query: 421 cttacttttccccgggatccgaacacggatcaagtaggaaacgcgcag-gganctgattc 479
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 22308 cttacttttccccgggatccgaacacggatcaagtaggaaacgcgcagcgggactgattc 22367
Query: 480 gttgtaaactagtcattcacttttttaacttgttatgatgtatgcacaggagaacagagg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22368 gttgtaaactagtcattcacttttttaacttgttatgatgtatgcacaggagaacagagg 22427
Query: 540 atgagaaaaaaaattgaaaattagaggatatataacgaaacacttataataaagcatact 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22428 atgagaaaaaaaattgaaaattagaggatatataacgaaacacttataataaagcatact 22487
Query: 600 ttctcccgtttctttggttagattccaaatttgctagtatccaaatcatcaatcaactga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22488 ttctcccgtttctttggttagattccaaatttgctagtatccaaatcatcaatcaactga 22547
Query: 660 aggca 664
|||||
Sbjct: 22548 aggca 22552
>3x_Contig645
Length = 2505
Score = 253 bits (127), Expect = 7e-67
Identities = 148/155 (95%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 895 aaccagtgcctgctgcgtggcaatgtgctggcagtgagacatctttctcaaaggccactg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2500 aaccagtgcctgctgcgtggcaatgtgctggcagtgagacatctttctcaaaggccactg 2441
Query: 955 gcaaggrctaagaggkttttgc-aamctctcagaatggggataaagtgaatgctccagtt 1013
|||||| |||||||| |||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 2440 gcaaggactaagaggtttttgcaaacctctcagaatggggataaagtgaatgctccagtt 2381
Query: 1014 tgggcattcaattttgaaa-tycagtgaagaacgg 1047
||| ||||||||||||||| | |||||||||||||
Sbjct: 2380 tggccattcaattttgaaattccagtgaagaacgg 2346
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8457
Number of Sequences: 1807
Number of extensions: 8457
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 2
length of query: 1047
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1031
effective length of database: 10,329,639
effective search space: 10649857809
effective search space used: 10649857809
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)